Publications
Showing entries 1 - 20 out of 850
2025
Wittlinger, J-P, Castejon Caballero, N, Hausmann, B, Berry, D & Schnorr, SL 2025, 'Shewanella is a putative producer of polyunsaturated fatty acids in the gut soil of the composting earthworm Eisenia fetida', Applied and Environmental Microbiology, pp. e0206924. https://doi.org/10.1128/aem.02069-24
Willemsen, A, Manzano-Marín, A & Horn, M 2025, 'Novel high-quality amoeba genomes reveal widespread codon usage mismatch between giant viruses and their hosts', Genome Biology and Evolution, vol. 17, no. 1, evae271. https://doi.org/10.1101/2024.09.23.614596, https://doi.org/10.1093/gbe/evae271
2024
Del Rey, YC, Kitzinger, K, Lund, MB, Schramm, A, Meyer, RL, Wagner, M & Schlafer, S 2024, 'pH-FISH: coupled microscale analysis of microbial identity and acid–base metabolism in complex biofilm samples', Microbiome, vol. 12, no. 1, 266. https://doi.org/10.1186/s40168-024-01977-9
Li, M, Thieringer, PH, Bayer, B, Kellom, M & Santoro, AE 2024, 'Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture', Microbiology resource announcements, vol. 13, no. 12, e00692-24. https://doi.org/10.1128/mra.00692-24
Arthofer, P, Panhölzl, F, Delafont, V, Hay, A, Reipert, S, Cyran, N, Wienkoop, S, Willemsen, A, Sifaoui, I, Arberas-Jiménez, I, Schulz, F, Lorenzo-Morales, J & Horn, M 2024, 'A giant virus infecting the amoeboflagellate Naegleria', Nature Communications, vol. 15, no. 1, 3307. https://doi.org/10.1038/s41467-024-47308-2
Lee, U-J, Gwak, J-H, Choi, S, Jung, M-Y, Lee, TK, Ryu, H, Imisi Awala, S, Wanek, W, Wagner, M, Quan, Z-X & Rhee, S-K 2024, '"Ca. Nitrosocosmicus" members are the dominant archaea associated with plant rhizospheres', mSphere, vol. 9, no. 12, e0082124. https://doi.org/10.1128/msphere.00821-24
Schmider, T, Hestnes, AG, Brzykcy, J, Schmidt, H, Schintlmeister, A, Roller, BRK, Teran, EJ, Söllinger, A, Schmidt, O, Polz, MF, Richter, A, Svenning, MM & Tveit, AT 2024, 'Physiological basis for atmospheric methane oxidation and methanotrophic growth on air', Nature Communications, vol. 15, no. 1, 4151. https://doi.org/10.1038/s41467-024-48197-1
Gruseck, RJ, Palatinszky, M, Wagner, M, Hofmann, T & Zumstein, M 2024, 'Quantification of Guanidine in Environmental Samples using Benzoin Derivatization and LC-MS Analysis', MethodsX, vol. 13, 102972. https://doi.org/10.1016/j.mex.2024.102972
Imminger, S, Meier, DV, Schintlmeister, A, Legin, A, Schnecker, J, Richter, A, Gillor, O, Eichorst, SA & Woebken, D 2024, 'Survival and rapid resuscitation permit limited productivity in desert microbial communities', Nature Communications, vol. 15, no. 1, 3056. https://doi.org/10.1038/s41467-024-46920-6
Pereira, FC, Ge, X, Kristensen, JM, Kirkegaard, RH, Maritsch, K, Szamosvári, D, Imminger, S, Seki, D, Shazzad, JB, Zhu, Y, Decorte, M, Hausmann, B, Berry, D, Wasmund, K, Schintlmeister, A, Böttcher, T, Cheng, J-X & Wagner, M 2024, 'The Parkinson's disease drug entacapone disrupts gut microbiome homoeostasis via iron sequestration', Nature Microbiology, vol. 9, no. 12, pp. 3165–3183. https://doi.org/10.1038/s41564-024-01853-0
Bauchinger, F, Seki, FD & Berry, D 2024, 'Characteristics of putative keystones in the healthy adult human gut microbiota as determined by correlation network analysis', Frontiers in Microbiology, vol. 15, 1454634. https://doi.org/10.3389/fmicb.2024.1454634
Trojan, D, García-Robledo, E, Hausmann, B, Revsbech, NP, Woebken, D & Eichorst, SA 2024, 'A respiro-fermentative strategy to survive nanoxia in Acidobacterium capsulatum', FEMS microbiology ecology, vol. 100, no. 12, fiae152. https://doi.org/10.1093/femsec/fiae152
Becker, JW, Pollak, S, Berta-Thompson, JW, Becker, KW, Braakman, R, Dooley, KD, Hackl, T, Coe, A, Arellano, A, LeGault, KN, Berube, PM, Biller, SJ, Cubillos-Ruiz, A, Van Mooy, BAS & Chisholm, SW 2024, 'Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution', mBio, vol. 15, no. 11, e03497-23. https://doi.org/10.1128/mbio.03497-23
Lien, Y-W, Amendola, D, Lee, KS, Bartlau, N, Xu, J, Furusawa, G, Polz, MF, Stocker, R, Weiss, GL & Pilhofer, M 2024, 'Mechanism of bacterial predation via ixotrophy', Science, vol. 386, no. 6719, eadp0614. https://doi.org/10.1126/science.adp0614
Steensen, K, Séneca, J, Bartlau, N, Yu, XA, Hussain, FA & Polz, MF 2024, 'Tailless and filamentous prophages are predominant in marine Vibrio', The ISME Journal, vol. 18, no. 1, wrae202. https://doi.org/10.1093/ismejo/wrae202
Liu, T, Duan, H, Lücker, S, Zheng, M, Daims, H, Yoan, Z & Jianhua, G 2024, 'Sustainable wastewater management through nitrogen-cycling microorganisms', Nature Water (Nat Water), vol. 2, pp. 936–952. https://doi.org/10.1038/s44221-024-00307-5
Hodzic, A, Veinović, G, Alic, A, Seki, FD, Kunert, M, Nikolov, G, Sukara, R, Supic, J, Tomanović, S & Berry, D 2024, 'A metalloprotease secreted by an environmentally acquired gut bacterium hinders Borrelia afzelii colonization in Ixodes ricinus', Frontiers in Cellular and Infection Microbiology, vol. 14, 1476266. https://doi.org/10.3389/fcimb.2024.1476266
Alcaraz, CM, Séneca, J, Kunert, M, Pree, C, Sudo, M & Petersen, JM 2024, 'Sulfur-oxidizing symbionts colonize the digestive tract of their lucinid hosts', ISME Journal, vol. 18, no. 1, wrae200. https://doi.org/10.1093/ismejo/wrae200
Seki, D, Kirkegaard, R, Osvatic, J, Hausmann, B, Séneca, J, Pjevac, P, Berger, A, J Hall, L, Wisgrill, L & Berry, D 2024, 'Gut microbiota genome features associated with brain injury in extremely premature infants', Gut microbes, vol. 16, no. 1, 2410479. https://doi.org/10.1080/19490976.2024.2410479
Wasmund, K, Singleton, C, Dahl Dueholm, MK, Wagner, M & Nielsen, PH 2024, 'The predicted secreted proteome of activated sludge microorganisms indicates distinct nutrient niches', mSystems, vol. 9, no. 10, e0030124. https://doi.org/10.1128/msystems.00301-24