Publications


2009


Le Roux, F, Zouine, M, Chakroun, N, Binesse, J, Saulnier, D, Bouchier, C, Zidane, N, Ma, L, Rusniok, C, Lajus, A, Buchrieser, C, Médigue, C, Polz, MF & Mazel, D 2009, 'Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity', Environmental Microbiology, vol. 11, no. 8, pp. 1959-70. https://doi.org/10.1111/j.1462-2920.2009.01918.x

Tzahor, S, Man-Aharonovich, D, Kirkup, BC, Yogev, T, Berman-Frank, I, Polz, MF, Béjà, O & Mandel-Gutfreund, Y 2009, 'A supervised learning approach for taxonomic classification of core-photosystem-II genes and transcripts in the marine environment', BMC Genomics, vol. 10, pp. 229. https://doi.org/10.1186/1471-2164-10-229

Joss, MJ, Koenig, JE, Labbate, M, Polz, MF, Gillings, MR, Stokes, HW, Doolittle, WF & Boucher, Y 2009, 'Acid: annotation of cassette and integron data', BMC Bioinformatics, vol. 10, pp. 118. https://doi.org/10.1186/1471-2105-10-118

Hubert, C, Loy, A, Nickel, M, Arnosti, C, Baranyi, C, Brüchert, V, Ferdelman, TG, Finsterbusch, K, Christensen, FM, de Rezende, JR, Vandieken, V & Jorgensen, BB 2009, 'A constant flux of diverse thermophilic bacteria into the cold Arctic seabed.', Science, vol. 325, no. 5947, pp. 1541-1544. https://doi.org/10.1126/science.1174012

Hoffmann, F, Radax, R, Woebken, D, Holtappels, M, Lavik, G, Rapp, HT, Schlaeppy, ML, Schleper, C & Kuypers, M 2009, 'Complex nitrogen cycling in the sponge Geodia barretti', Environmental Microbiology, vol. 11, no. 9, pp. 2228-2243. https://doi.org/10.1111/j.1462-2920.2009.01944.x

Daims, H 2009, Quantitative FISH for the cultivation-independent quantification of microbes in wastewater treatment plants. in PH Nielsen, H Daims & H Lemmer (eds), FISH Handbook for Biological Wastewater Treatment: Identification and quantification of microorganisms in activated sludge and biofilms by FISH. IWA Publishing, London, pp. 85-92.

Arnold, R, Brandmaier, S, Kleine, F, Tischler, P, Heinz, E, Behrens, S, Niinikoski, A, Mewes, HW, Horn, M & Rattei, T 2009, 'Sequence-based prediction of type III secreted proteins.', PLoS Pathogens, vol. 5, no. 4. https://doi.org/10.1371/journal.ppat.1000376

Daims, H, Maixner, F & Schmid, MC 2009, The nitrifying microbes: Ammonia oxidizers, nitrite oxidizers, and anaerobic ammonium oxidizers. in PH Nielsen, H Daims & H Lemmer (eds), FISH Handbook for Biological Wastewater Treatment: Identification and quantification of microorganisms in activated sludge and biofilms by FISH. IWA Publishing, London, pp. 9-17.

Schönmann, S, Loy, A, Wimmersberger, C, Sobek, J, Rehrauer, H, Frey, B, Vandamme, P & Eberl, L 2009, '16S rRNA gene-based phylogenetic microarray for simultaneous identification of members of the genus Burkholderia', Environmental Microbiology, vol. 11, pp. 779-800.

2008


Stewart, JR, Gast, RJ, Fujioka, RS, Solo-Gabriele, HM, Meschke, JS, Amaral-Zettler, LA, Del Castillo, E, Polz, MF, Collier, TK, Strom, MS, Sinigalliano, CD, Moeller, PDR & Holland, AF 2008, 'The coastal environment and human health: microbial indicators, pathogens, sentinels and reservoirs', Environmental health : a global access science source, vol. 7 Suppl 2, no. Suppl 2, pp. S3. https://doi.org/10.1186/1476-069X-7-S2-S3