Publications

Willemsen, A, Zwart, MP, Tromas, N, Majer, E, Daròs, JA & Elena, SF 2016, 'Multiple barriers to the evolution of alternative gene orders in a positive-strand rna virus', Genetics, vol. 202, no. 4, pp. 1503-1521. https://doi.org/10.1534/genetics.115.185017

Hupeden, J, Wegen, S, Off, S, Luecker, S, Bedarf, Y, Daims, H, Kuehn, C & Spieck, E 2016, 'Relative Abundance of Nitrotoga spp. in a Biofilter of a Cold-Freshwater Aquaculture Plant Appears To Be Stimulated by Slightly Acidic pH', Applied and Environmental Microbiology, vol. 82, no. 6, pp. 1838-1845. https://doi.org/10.1128/AEM.03163-15

Cordes, EE, Michel, APM, Petersen, JM, Wankel, SD, Ansorge, R, Girguis, PR, Leisch, N, Smart, C, Roman, C, Wetzel, S & Vidoudez, C 2016, 'ROV Hercules Investigates Brine Lakes on the Bottom of the Ocean', Oceanography, vol. 29, no. 1, eDoc: 732773, pp. 30-31.

Nesme, J, Achouak, W, Agathos, SN, Bailey, M, Baldrian, P, Brunel, D, Frostegård, Å, Heulin, T, Jansson, JK, Jurkevitch, E, Kruus, KL, Kowalchuk, GA, Lagares, A, Lappin-Scott, HM, Lemanceau, P, Le Paslier, D, Mandic-Mulec, I, Murrell, JC, Myrold, DD, Nalin, R, Nannipieri, P, Neufeld, JD, O'Gara, F, Parnell, JJ, Pühler, A, Pylro, V, Ramos, JL, Roesch, LFW, Schloter, M, Schleper, C, Sczyrba, A, Sessitsch, A, Sjöling, S, Sørensen, J, Sørensen, SJ, Tebbe, CC, Topp, E, Tsiamis, G, van Elsas, JD, van Keulen, G, Widmer, F, Wagner, M, Zhang, T, Zhang, X, Zhao, L, Zhu, Y-G, Vogel, TM & Simonet, P 2016, 'Back to the Future of Soil Metagenomics', Frontiers in Microbiology, vol. 7, no. FEB, 73. https://doi.org/10.3389/fmicb.2016.00073

Klose, J, Aistleitner, K, Horn, M , Krenn, L , Dirsch, V , Zehl, M & Bright, M 2016, 'Trophosome of the Deep-Sea Tubeworm Riftia pachyptila Inhibits Bacterial Growth', PLoS ONE, vol. 11, no. 1, e0146446, pp. e0146446. https://doi.org/10.1371/journal.pone.0146446

Beam, JP, Jay, ZJ, Schmid, MC, Rusch, DB, Romine, MF, M Jennings, RD, Kozubal, MA, Tringe, SG, Wagner, M & Inskeep, WP 2016, 'Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous 'streamer' community', The ISME Journal: multidisciplinary journal of microbial ecology, vol. 10, no. 1, pp. 210–224. https://doi.org/10.1038/ismej.2015.83

Söllinger, A, Schwab, C, Weinmaier, T, Loy, A, Tveit, AT, Schleper, C & Urich, T 2016, 'Phylogenetic and genomic analysis of Methanomassiliicoccales in wetlands and animal intestinal tracts reveals clade-specific habitat preferences', FEMS microbiology ecology, vol. 92, no. 1, fiv149. https://doi.org/10.1093/femsec/fiv149

Schagerl, M, Gschwandner, A-M, Wöbken, D & Angel, R 2016, 'Molecular nitrogen fixation in Arthospira fusiformis – a devious idea?', Proceedings Conference of the Phycology Section of the German Botanical Society.

Greuter, D, Loy, A , Horn, M & Rattei, T 2016, 'probeBase-an online resource for rRNA-targeted oligonucleotide probes and primers: New features 2016', Nucleic Acids Research, vol. 44, no. D1, pp. D586-D589. https://doi.org/10.1093/nar/gkv1232

Mishamandani, S, Gutierrez, T, Berry, D & Aitken, MD 2016, 'Response of the bacterial community associated with a cosmopolitan marine diatom to crude oil shows a preference for the biodegradation of aromatic hydrocarbons', Environmental Microbiology, vol. 18, no. 6, pp. 1817-1833. https://doi.org/10.1111/1462-2920.12988

Wasmund, K, Cooper, M, Schreiber, L, Lloyd, KG, Baker, BJ, Petersen, DG, Jørgensen, BB, Stepanauskas, R, Reinhardt, R, Schramm, A, Loy, A & Adrian, L 2016, 'Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi) in Sulfur Cycling', mBio, vol. 7, no. 3, e00266-16. https://doi.org/10.1128/mBio.00266-16

Daims, H, Lebedeva, EV, Pjevac, P, Han, P, Herbold, C, Albertsen, M, Jehmlich, N, Palatinszky, M, Vierheilig, J, Bulaev, A, Kirkegaard, RH, Bergen, MV, Rattei, T, Bendinger, B, Nielsen, PH & Wagner, M 2015, 'Complete nitrification by Nitrospira bacteria', Nature, vol. 528, no. 7583, pp. 504–509. https://doi.org/10.1038/nature16461

Domman, D & Horn, M 2015, 'Following the Footsteps of Chlamydial Gene Regulation', Molecular Biology and Evolution, vol. 32, no. 12, pp. 3035-3046. https://doi.org/10.1093/molbev/msv193

Hainzl, E, Stockinger, S, Rauch, I, Heider, S, Berry, D, Lassnig, C, Schwab, C, Rosebrock, F, Milinovich, G, Schlederer, M, Wagner, M , Schleper, C , Loy, A, Urich, T, Kenner, L, Han, X, Decker, T, Strobl, B & Müller, M 2015, 'Intestinal Epithelial Cell Tyrosine Kinase 2 Transduces IL-22 Signals To Protect from Acute Colitis', Journal of Immunology, vol. 195, no. 10, pp. 5011-5024. https://doi.org/10.4049/jimmunol.1402565

Martijn, J, Schulz, F, Zaremba-Niedzwiedzka, K, Viklund, J, Stepanauskas, R, Andersson, SGE, Horn, M, Guy, L & Ettema, TJG 2015, 'Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution', The ISME Journal: multidisciplinary journal of microbial ecology, vol. 9, no. 11, pp. 2373-2385. https://doi.org/10.1038/ismej.2015.46

Galipienso, L, Martínez, C, Willemsen, A, Alfaro-Férnandez, A, Ambrosio, IFS, Davino, S & Rubio, L 2015, 'Genetic variability and evolutionary analysis of parietaria mottle virus: role of selection and genetic exchange', Archives of Virology, vol. 160, no. 10, pp. 2611-2616. https://doi.org/10.1007/s00705-015-2550-8

Wagner, M 2015, 'Microbiology: Conductive consortia', Nature, vol. 526, no. 7574, pp. 513-514. https://doi.org/10.1038/526513a

Feldbauer, R, Schulz, F, Horn, M & Rattei, T 2015, 'Prediction of microbial phenotypes based on comparative genomics', BMC Bioinformatics, vol. 16 , no. 14, S1. https://doi.org/10.1186/1471-2105-16-S14-S1

Pernice, M, Dunn, SR, Tonk, L, Dove, S, Domart-Coulon, I, Hoppe, P, Schintlmeister, A , Wagner, M & Meibom, A 2015, 'A nanoscale secondary ion mass spectrometry study of dinoflagellate functional diversity in reef-building corals', Environmental Microbiology, vol. 17, no. 10, pp. 3570-3580. https://doi.org/10.1111/1462-2920.12518

Eichorst, S, Strasser, F, Woyke, T, Schintlmeister, A , Wagner, M & Wöbken, D 2015, 'Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils', FEMS microbiology ecology, vol. 91, no. 10. https://doi.org/10.1093/femsec/fiv106