Publications

Angel, R, Nepel, M, Panhoelzl, C, Schmidt, H, Herbold, CW, Eichorst, SA & Woebken, D 2018, 'Evaluation of Primers Targeting the Diazotroph Functional Gene and Development of NifMAP - A Bioinformatics Pipeline for Analyzing nifH Amplicon Data', Frontiers in Microbiology, vol. 9, 703. https://doi.org/10.3389/fmicb.2018.00703

Michalik, A, Schulz, F, Michalik, K, Wascher, F, Horn, M & Szklarzewicz, T 2018, 'Coexistence of novel gammaproteobacterial and Arsenophonus symbionts in the scale insect Greenisca brachypodii (Hemiptera, Coccomorpha: Eriococcidae)', Environmental Microbiology, vol. 20, no. 3, pp. 1148-1157. https://doi.org/10.1111/1462-2920.14057

Petersen, JM & Osvatic, J 2018, 'Microbiomes In Natura: Importance of Invertebrates in Understanding the Natural Variety of Animal-Microbe Interactions', mSystems, vol. 3, no. 2, e00179-17. https://doi.org/10.1128/mSystems.00179-17

Eichorst, SA, Trojan, D, Roux, S, Herbold, C, Rattei, T & Woebken, D 2018, 'Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments', Environmental Microbiology, vol. 20, no. 3, pp. 1041-1063. https://doi.org/10.1111/1462-2920.14043

Volland, J-M, Schintlmeister, A, Zambalos, H, Reipert, S, Mozetič, P, Espada Hinojosa, SM, Turk, V, Wagner, M & Bright, M 2018, 'NanoSIMS and tissue autoradiography reveal symbiont carbon fixation and organic carbon transfer to giant ciliate host', The ISME Journal: multidisciplinary journal of microbial ecology, vol. 12, no. 3, pp. 714-727. https://doi.org/10.1038/s41396-018-0069-1

Daebeler, A, Herbold, CW, Vierheilig, J, Sedlacek, CJ, Pjevac, P, Albertsen, M, Kirkegaard, RH, de la Torre, JR, Daims, H & Wagner, M 2018, 'Cultivation and Genomic Analysis of "Candidatus Nitrosocaldus islandicus," an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valley, Iceland', Frontiers in Microbiology, vol. 9, 193. https://doi.org/10.3389/fmicb.2018.00193

Hausmann, B, Pjevac, P, Schreck, K, Herbold, C, Daims, H , Wagner, M & Loy, A 2018, 'Draft Genome Sequence of Telmatospirillum siberiense 26-4b1, an Acidotolerant Peatland Alphaproteobacterium Potentially Involved in Sulfur Cycling', Genome Announcements, vol. 6, no. 4, e01524-17. https://doi.org/10.1128/genomeA.01524-17

Kauffman, KM, Hussain, FA, Yang, J, Arevalo, P, Brown, JM, Chang, WK, VanInsberghe, D, Elsherbini, J, Sharma, RS, Cutler, MB, Kelly, L & Polz, MF 2018, 'A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria', Nature, vol. 554, no. 7690, pp. 118-122. https://doi.org/10.1038/nature25474

Martin-Platero, AM, Cleary, B, Kauffman, K, Preheim, SP, McGillicuddy, DJ, Alm, EJ & Polz, MF 2018, 'High resolution time series reveals cohesive but short-lived communities in coastal plankton', Nature Communications, vol. 9, no. 1, 266, pp. 266. https://doi.org/10.1038/s41467-017-02571-4

Angel, R, Panhölzl, C, Gabriel, R, Herbold, C, Wanek, W , Richter, A , Eichorst, S & Wöbken, D 2018, 'Application of stable-isotope labelling techniques for the detection of active diazotrophs', Environmental Microbiology, vol. 20, no. 1, pp. 44-61. https://doi.org/10.1111/1462-2920.13954

Nepel, M, Richter, A , Kaiser, C , Wöbken, D & Mayer, V 2018, Microorganisms putatively involved in nutrient recycling of ant-plant associations by degrading chitin and cellulose. in 17th International Symposium on Microbial Ecology: Abstract book. pp. 66, 17th ISME - International Symposium on Microbial Ecology (Leipzig), Germany, 12/08/18.

Daims, H 2018, Stickstoffkreisläufe in der Abwasserreinigung - neue und bewährte Wege. in J Krampe (ed.), Aktuelle biologische Methoden und Verfahren in der Wassergütewirtschaft: ÖWAV-Seminar - Wien 2018, TU Wien, 27.-28. Februar 2018. Institut für Wassergüte und Ressourcenmanagement, Wien, Wiener Mitteilungen: Wasser - Abwasser - Gewässer, vol. 247, pp. 31-46.

Kauffman, KM & Polz, MF 2018, 'Streamlining standard bacteriophage methods for higher throughput', MethodsX, vol. 5, pp. 159-172. https://doi.org/10.1016/j.mex.2018.01.007

Herbold, CW, Lehtovirta-Morley, LE, Jung, M-Y, Jehmlich, N, Hausmann, B, Han, P, Loy, A, Pester, M, Sayavedra-Soto, LA, Rhee, S-K, Prosser, JI, Nicol, GW, Wagner, M & Gubry-Rangin, C 2017, 'Ammonia-oxidising archaea living at low pH: Insights from comparative genomics', Environmental Microbiology, vol. 19, no. 12, pp. 4939-4952. https://doi.org/10.1111/1462-2920.13971

Jochum, LM, Chen, X, Lever, MA, Loy, A, Jørgensen, BB, Schramm, A & Kjeldsen, KU 2017, 'Depth distribution and assembly of sulfate-reducing microbial communities in marine sediments of Aarhus Bay', Applied and Environmental Microbiology, vol. 83, no. 23, e01547-17, pp. e01547-17. https://doi.org/10.1128/AEM.01547-17

Liu, S, Han, P, Hink, L, Prosser, JI, Wagner, M & Brüggemann, N 2017, 'Abiotic Conversion of Extracellular NH2OH Contributes to N2O Emission during Ammonia Oxidation', Environmental Science & Technology, vol. 51, no. 22, pp. 13122-13132. https://doi.org/10.1021/acs.est.7b02360

Zöhrer, PA, Mölzer, C, Wallner, M, Berry, D & Wagner, K-H 2017, 'Yellow Fellows: Is the gut microbiota changed in mild hyperbilirubinemia?', Ernährung aktuell, vol. 2017, no. 4, pp. 19-20.

Collingro, A, Köstlbacher, S, Mussmann, M, Stepanauskas, R, Hallam, SJ & Horn, M 2017, 'Unexpected genomic features in widespread intracellular bacteria: evidence for motility of marine chlamydiae', The ISME Journal: multidisciplinary journal of microbial ecology, vol. 11, no. 10, pp. 2334-2344. https://doi.org/10.1038/ismej.2017.95

Lesaulnier, CC, Herbold, CW, Pelikan, C, Berry, D, Gérard, C, Le Coz, X, Gagnot, S, Niggemann, J, Dittmar, T, Singer, GA & Loy, A 2017, 'Bottled aqua incognita: Microbiota assembly and dissolved organic matter diversity in natural mineral waters', Microbiome, vol. 5, no. 1, 126, pp. 126. https://doi.org/10.1186/s40168-017-0344-9

Kits, KD, Sedlacek, CJ, Lebedeva, EV, Han, P, Bulaev, A, Pjevac, P, Daebeler, A, Romano, S, Albertsen, M, Stein, LY, Daims, H & Wagner, M 2017, 'Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle', Nature, vol. 549, no. 7671, pp. 269-272. https://doi.org/10.1038/nature23679