Publications
Showing entries 21 - 40 out of 858
2024
Becker, JW, Pollak, S, Berta-Thompson, JW, Becker, KW, Braakman, R, Dooley, KD, Hackl, T, Coe, A, Arellano, A, LeGault, KN, Berube, PM, Biller, SJ, Cubillos-Ruiz, A, Van Mooy, BAS & Chisholm, SW 2024, 'Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution', mBio, vol. 15, no. 11, e03497-23. https://doi.org/10.1128/mbio.03497-23
Lien, Y-W, Amendola, D, Lee, KS, Bartlau, N, Xu, J, Furusawa, G, Polz, MF, Stocker, R, Weiss, GL & Pilhofer, M 2024, 'Mechanism of bacterial predation via ixotrophy', Science, vol. 386, no. 6719, eadp0614. https://doi.org/10.1126/science.adp0614
Steensen, K, Séneca, J, Bartlau, N, Yu, XA, Hussain, FA & Polz, MF 2024, 'Tailless and filamentous prophages are predominant in marine Vibrio', The ISME Journal, vol. 18, no. 1, wrae202. https://doi.org/10.1093/ismejo/wrae202
Liu, T, Duan, H, Lücker, S, Zheng, M, Daims, H, Yoan, Z & Jianhua, G 2024, 'Sustainable wastewater management through nitrogen-cycling microorganisms', Nature Water (Nat Water), vol. 2, no. 10, 1836, pp. 936–952. https://doi.org/10.1038/s44221-024-00307-5
Hodzic, A, Veinović, G, Alic, A, Seki, FD, Kunert, M, Nikolov, G, Sukara, R, Supic, J, Tomanović, S & Berry, D 2024, 'A metalloprotease secreted by an environmentally acquired gut bacterium hinders Borrelia afzelii colonization in Ixodes ricinus', Frontiers in Cellular and Infection Microbiology, vol. 14, 1476266. https://doi.org/10.3389/fcimb.2024.1476266
Alcaraz, CM, Séneca, J, Kunert, M, Pree, C, Sudo, M & Petersen, JM 2024, 'Sulfur-oxidizing symbionts colonize the digestive tract of their lucinid hosts', ISME Journal, vol. 18, no. 1, wrae200. https://doi.org/10.1093/ismejo/wrae200
Seki, D, Kirkegaard, R, Osvatic, J, Hausmann, B, Séneca, J, Pjevac, P, Berger, A, J Hall, L, Wisgrill, L & Berry, D 2024, 'Gut microbiota genome features associated with brain injury in extremely premature infants', Gut microbes, vol. 16, no. 1, 2410479. https://doi.org/10.1080/19490976.2024.2410479
Wasmund, K, Singleton, C, Dahl Dueholm, MK, Wagner, M & Nielsen, PH 2024, 'The predicted secreted proteome of activated sludge microorganisms indicates distinct nutrient niches', mSystems, vol. 9, no. 10, e0030124. https://doi.org/10.1128/msystems.00301-24
Palatinszky, M, Herbold, CW, Sedlacek, CJ, Pühringer, D, Kitzinger, K, Giguere, AT, Wasmund, K, Nielsen, PH, Dueholm, MKD, Jehmlich, N, Gruseck, R, Legin, A, Kostan, J, Krasnici, N, Schreiner, C, Palmetzhofer, J, Hofmann, T, Zumstein, M, Djinović-Carugo, K, Daims, H & Wagner, M 2024, 'Growth of complete ammonia oxidizers on guanidine', Nature, vol. 633, no. 8030, pp. 646-653. https://doi.org/10.1038/s41586-024-07832-z
Bayer, B, Liu, S, Louie, K, Northen, TR, Wagner, M, Daims, H, Carlson, CA & Santoro, AE 2024, 'Metabolite release by nitrifiers facilitates metabolic interactions in the ocean', The ISME Journal, vol. 18, no. 1, wrae172. https://doi.org/10.1093/ismejo/wrae172
Crudo, F, Partsch, V, Del Favero, G, Petri, P, Braga, D, Danklmaier, A-C, Rollinger, JM, Varga, E, Berry, D & Marko, D 2024, 'Unlocking nature's arsenal: discovery of Alternaria mycotoxins as novel immunosuppressive and gut microbiota-targeting compounds', Toxicology Letters, vol. 399, no. Supplement 2, Meeting Abstract: P25-24, pp. S361-S362. https://doi.org/10.1016/j.toxlet.2024.07.860
Guseva, K, Mohrlok, M, Alteio, L, Schmidt, H, Pollak, S & Kaiser, C 2024, 'Bacteria face trade-offs in the decomposition of complex biopolymers', PLoS Computational Biology, vol. 20, no. 8, e1012320. https://doi.org/10.1371/journal.pcbi.1012320
Shan, X, Wasson, PA, Rao, YQ, Backer, S, Leal, L, Albright, VC, Gao, W, Chai, Y, Sichert, A, Pollak, S, Yin, L & Cordero, OX 2024, 'Simple Genomic Traits Predict Rates of Polysaccharide Biodegradation', Environmental Science and Technology, vol. 58, no. 29, pp. 13000-13009. https://doi.org/10.1021/acs.est.4c02769
Dietrich, M, Panhölzl, C, Angel, R, Giguere, AT, Randi, D, Hausmann, B, Herbold, CW, Pötsch, EM, Schaumberger, A, Eichorst, SA & Woebken, D 2024, 'Plant roots affect free-living diazotroph communities in temperate grassland soils despite decades of fertilization', Communications Biology, vol. 7, no. 1, 846. https://doi.org/10.1038/s42003-024-06522-w
Miettinen, TP, Gomez, A, Wu, Y, Wu, W, Usherwood, TR, Hwang, Y, Roller, BRK, Polz, MF & Manalis, SR 2024, 'Cell size, density, and nutrient dependency of unicellular algal gravitational sinking velocities', Science Advances, vol. 10, no. 27, adn8356. https://doi.org/10.1126/sciadv.adn8356
Hohagen, M, Sánchez, L, Herbst, AJ, Kählig, H, Shin, JW, Berry, D, Del Favero, G & Kleitz, F 2024, 'MANNosylation of Mesoporous Silica Nanoparticles Modifies TLR4 Localization and NF-κB Translocation in T24 Bladder Cancer Cells', Advanced Healthcare Materials, vol. 13, no. 17, 2304150. https://doi.org/10.1002/adhm.202304150
Deehan, EC, Zhang, Z, Nguyen, NK, Perez-Muñoz, ME, Cole, J, Riva, A, Berry, D, Prado, CM & Walter, J 2024, 'Adaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum', Gut microbes, vol. 16, no. 1, 2363021. https://doi.org/10.1080/19490976.2024.2363021
Oesterle, I, Ayeni, KI, Ezekiel, CN, Berry, D, Rompel, A & Warth, B 2024, 'Insights into the early-life chemical exposome of Nigerian infants and potential correlations with the developing gut microbiome', Environment International, vol. 188, 108766. https://doi.org/10.1016/j.envint.2024.108766
Sudo, M, Osvatic, J, Taylor, JD, Dufour, SC, Prathep, A, Wilkins, LGE, Rattei, T, Yuen, B & Petersen, JM 2024, 'SoxY gene family expansion underpins adaptation to diverse hosts and environments in symbiotic sulfide oxidizers', mSystems, vol. 9, no. 6, e01135-23. https://doi.org/10.1128/msystems.01135-23
Morel-Letelier, I, Yuen, B, Kück, AC, Camacho-García, YE, Petersen, JM, Lara, M, Leray, M, Eisen, JA, Osvatic, JT, Gros, O & Wilkins, LGE 2024, 'Adaptations to nitrogen availability drive ecological divergence of chemosynthetic symbionts', PLoS Genetics, vol. 20, no. 5, e1011295. https://doi.org/10.1371/journal.pgen.1011295