Publications

Deehan, EC, Zhang, Z, Nguyen, NK, Perez-Muñoz, ME, Cole, J, Riva, A, Berry, D, Prado, CM & Walter, J 2024, 'Adaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum', Gut microbes, vol. 16, no. 1, 2363021. https://doi.org/10.1080/19490976.2024.2363021

Oesterle, I, Ayeni, KI, Ezekiel, CN, Berry, D , Rompel, A & Warth, B 2024, 'Insights into the early-life chemical exposome of Nigerian infants and potential correlations with the developing gut microbiome', Environment International, vol. 188, 108766. https://doi.org/10.1016/j.envint.2024.108766

Sudo, M, Osvatic, J, Taylor, JD, Dufour, SC, Prathep, A, Wilkins, LGE, Rattei, T, Yuen, B & Petersen, JM 2024, 'SoxY gene family expansion underpins adaptation to diverse hosts and environments in symbiotic sulfide oxidizers', mSystems, vol. 9, no. 6, e01135-23. https://doi.org/10.1128/msystems.01135-23

Morel-Letelier, I, Yuen, B, Kück, AC, Camacho-García, YE, Petersen, JM, Lara, M, Leray, M, Eisen, JA, Osvatic, JT, Gros, O & Wilkins, LGE 2024, 'Adaptations to nitrogen availability drive ecological divergence of chemosynthetic symbionts', PLoS Genetics, vol. 20, no. 5, e1011295. https://doi.org/10.1371/journal.pgen.1011295

Awala, SI, Gwak, J-H, Kim, Y, Jung, M-Y, Dunfield, PF, Wagner, M & Rhee, S-K 2024, 'Nitrous oxide respiration in acidophilic methanotrophs', Nature Communications, vol. 15, no. 1, 4226. https://doi.org/10.1038/s41467-024-48161-z

Lee, KS, Landry, Z, Athar, A, Alcolombri, U, Pramoj Na Ayutthaya, P, Berry, D, de Bettignies, P, Cheng, J-X, Csucs, G, Cui, L, Deckert, V, Dieing, T, Dionne, J, Doskocil, O, D'Souza, G, García-Timermans, C, Gierlinger, N, Goda, K, Hatzenpichler, R, Henshaw, RJ, Huang, WE, Iermak, I, Ivleva, NP, Kneipp, J, Kubryk, P, Küsel, K, Lee, TK, Lee, SS, Ma, B, Martínez-Pérez, C, Matousek, P, Meckenstock, RU, Min, W, Mojzeš, P, Müller, O, Kumar, N, Nielsen, PH, Notingher, I, Palatinszky, M, Pereira, FC, Pezzotti, G, Pilat, Z, Plesinger, F, Popp, J, Probst, AJ, Riva, A, Saleh, AAE, Samek, O, Sapers, HM, Schubert, OT, Stubbusch, AKM, Tadesse, LF, Taylor, GT, Wagner, M, Wang, J, Yin, H, Yue, Y, Zenobi, R, Zini, J, Sarkans, U & Stocker, R 2024, 'MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data', Nature Microbiology, vol. 9, no. 5, pp. 1152-1156. https://doi.org/10.1038/s41564-024-01656-3

Foessleitner, P, Pjevac, P, Granser, S, Wisgrill, L, Pummer, L, Eckel, F, Seki, D, Berry, D, Hausmann, B & Farr, A 2024, 'The maternal microbiome in pregnancy, delivery, and early-stage development of neonatal microbiome after cesarean section: A prospective longitudinal study', Acta Obstetricia et Gynecologica Scandinavica, vol. 103, no. 5, pp. 832-841. https://doi.org/10.1111/aogs.14773

Glasl, B, Luter, HM, Damjanovic, K, Kitzinger, K, Mueller, AJ, Mahler, L, Engelberts, JP, Rix, L, Osvatic, JT, Hausmann, B, Séneca, J , Daims, H , Pjevac, P & Wagner, M 2024, 'Co-occurring nitrifying symbiont lineages are vertically inherited and widespread in marine sponges', The ISME Journal, vol. 18, no. 1, wrae069. https://doi.org/10.1093/ismejo/wrae069

Loy, A 2024, Biodiversität in Moorböden: Neue Mikroorganismen und kryptische Redoxprozesse im Schwefelkreislauf. Rundgespräche Forum Ökologie, vol. 50, vol. 50, Verlag Dr. Friedrich Pfeil.

Pristner, M, Wasinger, D , Seki, D, Klebermaß-Schrehof, K, Berger, A, Berry, D, Wisgrill, L & Warth, B 2024, 'Neuroactive metabolites and bile acids are altered in extremely premature infants with brain injury', Cell Reports Medicine, vol. 5, no. 4, 101480. https://doi.org/10.1016/j.xcrm.2024.101480

Maire, J, Collingro, A , Horn, M & van Oppen, MJH 2024, 'Chlamydiae in corals: shared functional potential despite broad taxonomic diversity', ISME Communications, vol. 4, no. 1, ycae054. https://doi.org/10.1093/ismeco/ycae054

Hu, H, Kristensen, JM, Herbold, CW, Pjevac, P , Kitzinger, K, Hausmann, B, Dueholm, MKD, Nielsen, PH & Wagner, M 2024, 'Global abundance patterns, diversity, and ecology of Patescibacteria in wastewater treatment plants', Microbiome, vol. 12, 55. https://doi.org/10.1186/s40168-024-01769-1

Ayeni, KI , Seki, D , Pjevac, P, Hausmann, B, Krausová, M, Braun, D, Wisgrill, L, Berry, D , Warth, B & Ezekiel, CN 2024, 'Biomonitoring of Dietary Mycotoxin Exposure and Associated Impact on the Gut Microbiome in Nigerian Infants', Environmental Science & Technology, vol. 58, no. 5, pp. 2236-2246. https://doi.org/10.1021/acs.est.3c07786

Ayeni, KI , Berry, D, Ezekiel, CN & Warth, B 2024, 'Enhancing microbiome research in sub-Saharan Africa', Trends in Microbiology, vol. 32, no. 2, pp. 111-115. https://doi.org/10.1016/j.tim.2023.11.003

Yu, X, McLean, C, Hehemann, J-H, Angeles-Albores, D, Wu, F, Muszynski, A, Corzett, CH, Azadi, P, Kujawinski, EB, Alm, E & Polz, MF 2024, 'Low-level resource partitioning supports co-existence among functionally redundant bacteria during successional dynamics', The ISME Journal: multidisciplinary journal of microbial ecology, vol. 18, no. 1, wrad013. https://doi.org/10.1093/ismejo/wrad013

Kop, LFM, Koch, H, Jetten, MSM, Daims, H & Lücker, S 2024, 'Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses', ISME Communications, vol. 4, no. 1, ycad017. https://doi.org/10.1093/ismeco/ycad017

Maire, J, Collingro, A, Tandon, K, Parkville, T, Judd, LM, Horn, M, Blackall, LL & van Oppen, MJH 2024, 'Chlamydiae as symbionts of photosynthetic dinoflagellates', The ISME Journal, vol. 18, no. 1, wrae139. https://doi.org/10.1093/ismejo/wrae139

Barrajon-Santos, V, Nepel, M, Hausmann, B, Voglmayr, H , Woebken, D & Mayer, VE 2024, 'Dynamics and drivers of fungal communities in a multipartite ant-plant association', BMC Biology, vol. 22, no. 1, 112. https://doi.org/10.1186/s12915-024-01897-y

Nepel, M, Mayer, VE, Barrajon-Santos, V & Woebken, D 2023, 'Bacterial diversity in arboreal ant nesting spaces is linked to colony developmental stage', Communications Biology, vol. 6, no. 1, 1217. https://doi.org/10.1038/s42003-023-05577-5

Ye, H, Borusak, S, Eberl, C, Krasenbrink, J, Weiss, AS, Chen, S, Hanson, BT, Hausmann, B, Herbold, CW, Pristner, M, Zwirzitz, B, Warth, B , Pjevac, P, Schleheck, D, Stecher, B & Loy, A 2023, 'Ecophysiology and interactions of a taurine-respiring bacterium in the mouse gut', Nature Communications, vol. 14, no. 1, 5533. https://doi.org/10.1038/s41467-023-41008-z