Congratulations, Dr. Alcaraz!
DOME
Cristina Alcaraz successfully defended her PhD thesis entitled "Host-microbe interactions in marine lucinid clams" on February 27, 2025.
Division of Microbial Ecology (DOME)
Centre for Microbiology and Environmental Systems Science
About DOME
The Division of Microbial Ecology | DOME at the Centre for Microbiology and Environmental Systems Science | CeMESS is a team of microbiologists and molecular biologists. Our mission is to unravel the complexities of microbial life and its profound impact on our health and environment.
Our researchers explore the evolution, ecophysiology, interactions and functions of microbes across a broad range of systems. We apply cutting-edge methods, from 'omics analysis, to single-cell isotope probing, to microbial imaging, to computational community modelling.
CeMESS/Maximilian Prag
Research Projects
Get to know our research by exploring our active projects and the researcher profiles of our principle investigators.
Education
We are committed to nurturing the next generation of scientists, including undergraduate and doctoral programs, as well as intensive methods-based courses.
Facilities | Ressources
Our Facilities and Ressources include Joint Microbiome Facility, NanoSIMS, probeBase, and daime.
News
DOC Fellowship for Alejandro Llanos-Lizcano
DOME
CeMESS PhD student Alejandro Llanos-Lizcano has been awarded a prestigious DOC Fellowship from the Austrian Academy of Sciences (ÖAW). The fellowship…
STEM Outreach with Nachbarinnen
DOME
In July, CeMESS had the pleasure of hosting another STEM (Science, Technology, Engineering, and Mathematics) outreach event. Organized by DOMEie Yusuf…
DOC Fellowship for Joana Góis Valério
DOME
Joana Góis Valério, PhD student at CeMESS, has been awarded a DOC Fellowship by the Austrian Academy of Sciences (ÖAW). With this competitive grant,…
New Paper: Chlamydiae give up extracellular stage to thrive in social amoebae
DOME
Many intracellular bacteria rely on an extracellular stage to move between hosts – but what happens when that’s no longer needed? A new study, now…
Congratulations Dr. Bauchinger!
DOME
Franziska Bauchinger successfully defended her PhD thesis entitled "Insights into community composition, function and structure of the human gut…
Events
High-pressure transparent micro- and millifluidics: studying reactive fluidic media under pressure and temperature
DOME Lecture Series
Samuel Marre
Studying extremophilic microorganisms from deep environments at lab scale using high-pressure/high temperature multiscale approaches
DOME Lecture Series
Anaïs Cario
Ecology, ecosystem services and evolution of freshwater ammonia oxidizing archaea
DOME Lecture Series
Michael Pester
Latest Publications at DOME
Krasenbrink J, Hanson BT, Weiss AS, Borusak S, Tanabe TS, Lang M et al. Sulfoquinovose is exclusively metabolized by the gut microbiota and degraded differently in mice and humans. Microbiome. 2025 Dec;13(1):184. doi: 10.1186/s40168-025-02175-x
Ye H, Šlipogor V, Hanson BT, Séneca J, Hausmann B, Herbold CW et al. Associations between gut microbiota and personality traits: insights from a captive common marmoset (
Callithrix jacchus) colony. Microbiology Spectrum. 2025 Nov 18;e0044325. Epub 2025 Nov 18. doi: 10.1128/spectrum.00443-25
Hodgskiss LH, Kerou M, Luo ZH, Bayer B, Maier A, Weckwerth W et al. Metabolic response of a chemolithoautotrophic archaeon to carbon limitation. mSystems. 2025 Oct 22;10(10):1-20. e0073225. doi: 10.1128/msystems.00732-25
Data Reuse Consortium, Wagner M, Rattei T, Osvatic J, Speth D. A roadmap for equitable reuse of public microbiome data. Nature Microbiology. 2025 Sept 26;10(10):2384-2395. Epub 2025 Sept 26. doi: 10.1038/s41564-025-02116-2
Crudo F, Petri P, Pacchione M, Dall'Asta C, Birse N, Berry D et al. Alternaria mycotoxins and gut microbiota: antimicrobial properties and bacteria-dependent modulation of mycotoxin immunotoxicity. Toxicology Letters. 2025 Sept;411(Supplement: S). doi: 10.1016/j.toxlet.2025.07.160
Centre for Microbiology and Environmental Systems Science
University of Vienna
CeMESS/Maximilian Prag