DOME

Division of Microbial Ecology (DOME)

Centre for Microbiology and Environmental Systems Science

About DOME

The Division of Microbial Ecology | DOME at the Centre for Microbiology and Environmental Systems Science | CeMESS is a team of microbiologists and molecular biologists. Our mission is to unravel the complexities of microbial life and its profound impact on our health and environment.

Our researchers explore the evolution, ecophysiology, interactions and functions of microbes across a broad range of systems. We apply cutting-edge methods, from 'omics analysis, to single-cell isotope probing, to microbial imaging, to computational community modelling.

More about CeMESS

News

Unlocking the Microbiome: Podcast Episode with Michael Wagner

12.03.2025 DOME

How do kissing, C-sections, and handwashing shape our microbiome? In the latest episode of Dr. Bezard's Morgenbesprechnung, CeMESS (DOME) key…

Three Marie Skłodowska-Curie Postdoctoral Fellowships awarded to CeMESS

18.02.2025 CeMESS

Congratulations to Valentin Waschulin, Ruizhe Pei and Tomohisa Sebastian Tanabe, who each received a highly competitive Marie Skłodowska-Curie…

ITA Wien visits DOME

07.02.2025 DOME

In January the M.I.N.T. (mathematics, informatics, natural sciences and technology) project group from the Individualisierte Teil-Ausbildungen (ITA)…

David Berry awarded WWTF Life Sciences 2024 Grant

07.01.2025 DOME

David Berry of DOME has been awarded a WWTF (Vienna Science and Technology Fund) Life Sciences 2024 grant. His project focuses on engineering gut…

BaMiKo Project featured in FWF SCILOG Magazine

23.12.2024 DOME

The FWF SCILOG magazine has spotlighted the BaMiKo project led by David Berry (DOME Division). This inspiring feature showcases how microbiome science…

Michael Wagner at ARTE:Saloon live talk

20.12.2024 DOME

CoE Microplanet Director of Research Michael Wagner joined the discussion on the power of microbes.

Events

Imaging anatomic structure and metabolic function in animal-microbe symbioses

28.01.2021 DOME Lecture Series

Benedikt Geier

Ecology of ammonia oxidizers in engineered aquatic environments

14.01.2021 DOME Lecture Series

Josh Neufeld

Defining and controlling gut microbial gene products for therapeutic gain

10.12.2020 DOME Lecture Series

Matthew Redinbo

Latest Publications at DOME

Kralova S, Spacek P, Gafriller J, Bezdicek M, Medvedcova V, Séneca J et al. Kineochelins-A New Group of Siderophores From an Antarctic Bacterium. Microbial Biotechnology. 2026 Jun;19(6):1-24. e70386. doi: 10.1111/1751-7915.70386

Abergel C, Abrahão JS, Coulibaly F, Fischer M, Jeudy S, Knorr RL et al. Infection cycles of viruses of the phylum Nucleocytoviricota. Nature Reviews. Microbiology. 2026 May 29. Epub 2026 May 29. doi: 10.1038/s41579-026-01319-6

Hodžić A, Kunert M, Juračić M, Veinović G, Sukara R, Tomanović S et al. Immune-mediated microbial interference governs Borrelia colonization of the tick gut. iScience. 2026 May 15;29(5):115628. doi: 10.1016/j.isci.2026.115628

Treichel NS, Pauvert C, Séneca J , Pjevac P , Berry D, Penders J et al. Benchmarking of shotgun sequencing depth reveals the potential and limitations of shallow metagenomics and strain-level analysis. Nature Microbiology. 2026 May;11(5):1233-1244. Epub 2026 Apr 21. doi: 10.1038/s41564-026-02334-2

Iriarte-Mesa C, Juère E, Bileck A, Kremsmayr T, Goodson ML, Ehrlich A et al. Mesoporous Silica Nanoparticles-Based Formulations for Enhanced Oral Delivery of Peptide Drugs: A Case Study on Insulin. Small. 2026 Apr 27;22(24):e13347. doi: 10.1002/smll.202513347